public abstract class Result extends java.lang.Object implements java.lang.Iterable<Hit>
Constructor and Description |
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Result(java.lang.String program,
java.lang.String version,
java.lang.String reference,
java.lang.String dbFile,
java.util.HashMap<java.lang.String,java.lang.String> programSpecificParameters,
int iterationNumber,
java.lang.String queryID,
java.lang.String queryDef,
int queryLength,
java.util.List<Hit> hits,
Sequence querySequence) |
Modifier and Type | Method and Description |
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boolean |
equals(java.lang.Object obj)
Experimental.
|
java.lang.String |
getDbFile() |
int |
getHitCounter() |
int |
getIterationNumber() |
java.lang.String |
getProgram() |
java.lang.String |
getProgramSpecificParameter(java.lang.String key) |
java.util.Set<java.lang.String> |
getProgramSpecificParametersList() |
java.lang.String |
getQueryDef() |
java.lang.String |
getQueryID() |
int |
getQueryLength() |
Sequence |
getQuerySequence()
returns the reference to the original and whole sequence used to query the database.
|
java.lang.String |
getReference() |
java.lang.String |
getVersion() |
int |
hashCode() |
java.util.Iterator<Hit> |
iterator() |
public Result(java.lang.String program, java.lang.String version, java.lang.String reference, java.lang.String dbFile, java.util.HashMap<java.lang.String,java.lang.String> programSpecificParameters, int iterationNumber, java.lang.String queryID, java.lang.String queryDef, int queryLength, java.util.List<Hit> hits, Sequence querySequence)
public int hashCode()
hashCode
in class java.lang.Object
public boolean equals(java.lang.Object obj)
equals
in class java.lang.Object
public int getIterationNumber()
public java.lang.String getQueryID()
public java.lang.String getQueryDef()
public int getQueryLength()
public int getHitCounter()
public java.lang.String getProgram()
public java.lang.String getVersion()
public java.lang.String getReference()
public java.lang.String getDbFile()
public java.util.Set<java.lang.String> getProgramSpecificParametersList()
public java.lang.String getProgramSpecificParameter(java.lang.String key)
public Sequence getQuerySequence()